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When loading the BD for all disks on all seasons
Title 00041.mpls is equal to title 00009.mpls and was skipped
Title 00041.mpls(1) is equal to title 00010.mpls and was skipped
Title 00041.mpls(3) is equal to title 00012.mpls and was skipped
Title 00041.mpls(4) is equal to title 00013.mpls and was skipped
Title 00041.mpls(5) is equal to title 00014.mpls and was skipped
Title 00041.mpls(6) is equal to title 00015.mpls and was skipped
Title 00041.mpls(7) is equal to title 00016.mpls and was skipped
Title 00041.mpls(9) is equal to title 00018.mpls and was skipped

41 is duplicate but 41 is also marathon mode. I play the BD's in Leawo and select 41 to have none of the intros/outros play besides the first and last one.

I tried some of the suggestions I found here on the forums. Back up the disc and remove the smaller playlist files. However 41 is broken up between the separate videos and contains the start and ends. It does not keep 41 together as a single file.