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For this one I think that the DVD is defective.

003007:0000 Using direct disc access mode
003028:0000 Title #1 was added (1 cell(s), 0:02:25)
003025:0000 Title #2 has length of 12 seconds which is less than minimum title length of 120 seconds and was therefore skipped
003025:0000 Title #3 has ...

The error appear when I want to extrat this one:
Title information
Source title ID: 23
Duration: 2:53:17
Chapters count: 31
Size: 7.0 GB
Segment count: 1
Segment map: 1-31
File name: title05.mkv

No error appear when I want to extract this one:
Title information
Source title ID: 24
Duration: 2:52:12 ...

Debug log started at Thu Jun 19 18:42:36 2014 , written by MakeMKV v1.8.11 linux(x64-release)
Using 524544KB for read cache.
001005:0000 MakeMKV v1.8.11 linux(x64-release) started
001004:0000 Debug logging enabled, log will be saved as /home/samuel/MakeMKV_log.txt
003007:0000 Using direct disc ...